Download E-books Information-Theoretic Evaluation for Computational Biomedical Ontologies (SpringerBriefs in Computer Science) PDF

The advance of powerful tools for the prediction of ontological annotations is a crucial aim in computational biology, but comparing their functionality is hard as a result of difficulties attributable to the constitution of biomedical ontologies and incomplete annotations of genes. This paintings proposes an information-theoretic framework to guage the functionality of computational protein functionality prediction. A Bayesian community is used, established in accordance with the underlying ontology, to version the earlier chance of a protein's functionality. The thoughts of incorrect information and last uncertainty are then outlined, that may be visible as analogs of precision and remember. eventually, semantic distance is proposed as a unmarried statistic for rating type types. The technique is evaluated through reading 3 protein functionality predictors of gene ontology phrases. The paintings addresses numerous weaknesses of present metrics, and offers necessary insights into the functionality of protein functionality prediction instruments.

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Read or Download Information-Theoretic Evaluation for Computational Biomedical Ontologies (SpringerBriefs in Computer Science) PDF

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